Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf11bO08712 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfrsf11bO08712 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11bO08712 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf11bO08712 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11bO08712 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11bO08712 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11bO08712 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Gm40881-201ENSMUST00000223397 166 ntBASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11bO08712 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.53■□□□□ 0.88
Tnfrsf11bO08712 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tnfrsf11bO08712 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Gm7143-201ENSMUST00000222811 859 ntBASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11bO08712 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11bO08712 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11bO08712 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms