Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AlyrefO08583 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AlyrefO08583 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AlyrefO08583 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AlyrefO08583 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AlyrefO08583 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AlyrefO08583 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
AlyrefO08583 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
AlyrefO08583 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AlyrefO08583 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
AlyrefO08583 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
AlyrefO08583 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
AlyrefO08583 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
AlyrefO08583 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.46■□□□□ 0.87
AlyrefO08583 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.46■□□□□ 0.87
AlyrefO08583 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.46■□□□□ 0.87
AlyrefO08583 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AlyrefO08583 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AlyrefO08583 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.45■□□□□ 0.86
AlyrefO08583 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.45■□□□□ 0.86
AlyrefO08583 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AlyrefO08583 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AlyrefO08583 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
AlyrefO08583 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
AlyrefO08583 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AlyrefO08583 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
AlyrefO08583 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
AlyrefO08583 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AlyrefO08583 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AlyrefO08583 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.43■□□□□ 0.86
AlyrefO08583 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AlyrefO08583 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
AlyrefO08583 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.42■□□□□ 0.86
AlyrefO08583 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AlyrefO08583 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.42■□□□□ 0.86
AlyrefO08583 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AlyrefO08583 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
AlyrefO08583 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AlyrefO08583 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AlyrefO08583 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AlyrefO08583 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AlyrefO08583 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AlyrefO08583 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
AlyrefO08583 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AlyrefO08583 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AlyrefO08583 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AlyrefO08583 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.39■□□□□ 0.85
AlyrefO08583 Mir5133-201ENSMUST00000174955 77 ntBASIC20.39■□□□□ 0.85
AlyrefO08583 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.38■□□□□ 0.85
AlyrefO08583 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.38■□□□□ 0.85
AlyrefO08583 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
AlyrefO08583 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
AlyrefO08583 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AlyrefO08583 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.38■□□□□ 0.85
AlyrefO08583 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.37■□□□□ 0.85
AlyrefO08583 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
AlyrefO08583 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
AlyrefO08583 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.37■□□□□ 0.85
AlyrefO08583 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.37■□□□□ 0.85
AlyrefO08583 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
AlyrefO08583 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AlyrefO08583 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms