Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
B020004C17RikJ3QP07 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
B020004C17RikJ3QP07 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.95■■□□□ 1.26
B020004C17RikJ3QP07 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
B020004C17RikJ3QP07 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.95■■□□□ 1.26
B020004C17RikJ3QP07 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
B020004C17RikJ3QP07 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
B020004C17RikJ3QP07 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
B020004C17RikJ3QP07 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
B020004C17RikJ3QP07 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Mir6236-201ENSMUST00000184437 123 ntBASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
B020004C17RikJ3QP07 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
B020004C17RikJ3QP07 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.89■■□□□ 1.26
B020004C17RikJ3QP07 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
B020004C17RikJ3QP07 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
B020004C17RikJ3QP07 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
B020004C17RikJ3QP07 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Gm27011-201ENSMUST00000182352 972 ntBASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
B020004C17RikJ3QP07 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
B020004C17RikJ3QP07 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
B020004C17RikJ3QP07 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Gm12933-201ENSMUST00000120203 872 ntBASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
B020004C17RikJ3QP07 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
B020004C17RikJ3QP07 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
B020004C17RikJ3QP07 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms