Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3139J3QK78 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3139J3QK78 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3139J3QK78 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3139J3QK78 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.2■□□□□ 0.82
Gm3139J3QK78 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.2■□□□□ 0.82
Gm3139J3QK78 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3139J3QK78 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3139J3QK78 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3139J3QK78 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3139J3QK78 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3139J3QK78 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm3139J3QK78 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3139J3QK78 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Gm3139J3QK78 Mir6236-201ENSMUST00000184437 123 ntBASIC20.17■□□□□ 0.82
Gm3139J3QK78 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3139J3QK78 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Mir7075-201ENSMUST00000184187 82 ntBASIC20.16■□□□□ 0.82
Gm3139J3QK78 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3139J3QK78 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Gm3139J3QK78 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm3139J3QK78 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.14■□□□□ 0.82
Gm3139J3QK78 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.14■□□□□ 0.81
Gm3139J3QK78 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm3139J3QK78 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3139J3QK78 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3139J3QK78 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3139J3QK78 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3139J3QK78 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms