Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm17535J3KMR8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm17535J3KMR8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm17535J3KMR8 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.64■■□□□ 1.06
Gm17535J3KMR8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm17535J3KMR8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm17535J3KMR8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm17535J3KMR8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm17535J3KMR8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.64■■□□□ 1.05
Gm17535J3KMR8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Gm17535J3KMR8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm17535J3KMR8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm17535J3KMR8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Gm8493-201ENSMUST00000196881 489 ntBASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Gm43173-201ENSMUST00000202246 593 ntBASIC21.62■■□□□ 1.05
Gm17535J3KMR8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm17535J3KMR8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Spcs1-204ENSMUST00000226782 949 ntBASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm17535J3KMR8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Mir6236-201ENSMUST00000184437 123 ntBASIC21.6■■□□□ 1.05
Gm17535J3KMR8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Gm17535J3KMR8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm17535J3KMR8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Gm17535J3KMR8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.58■■□□□ 1.04
Gm17535J3KMR8 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.58■■□□□ 1.04
Gm17535J3KMR8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm17535J3KMR8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm17535J3KMR8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm17535J3KMR8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Gm17535J3KMR8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms