Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
9930021J03RikH3BKP8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
9930021J03RikH3BKP8 Gm27454-201ENSMUST00000185090 204 ntBASIC18.9■□□□□ 0.62
9930021J03RikH3BKP8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
9930021J03RikH3BKP8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
9930021J03RikH3BKP8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
9930021J03RikH3BKP8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
9930021J03RikH3BKP8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
9930021J03RikH3BKP8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Gm43137-201ENSMUST00000198052 594 ntBASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
9930021J03RikH3BKP8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Gm45417-201ENSMUST00000209533 758 ntBASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
9930021J03RikH3BKP8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.84■□□□□ 0.61
9930021J03RikH3BKP8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
9930021J03RikH3BKP8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
9930021J03RikH3BKP8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
9930021J03RikH3BKP8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
9930021J03RikH3BKP8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms