Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh9F8VPK8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh9F8VPK8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh9F8VPK8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh9F8VPK8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh9F8VPK8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.77■□□□□ 0.91
Pcdh9F8VPK8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdh9F8VPK8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdh9F8VPK8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh9F8VPK8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh9F8VPK8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
Pcdh9F8VPK8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh9F8VPK8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh9F8VPK8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh9F8VPK8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh9F8VPK8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh9F8VPK8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh9F8VPK8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh9F8VPK8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdh9F8VPK8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh9F8VPK8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdh9F8VPK8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdh9F8VPK8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh9F8VPK8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms