Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc188F6WEU2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.91■□□□□ 0.94
Ccdc188F6WEU2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc188F6WEU2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc188F6WEU2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc188F6WEU2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc188F6WEU2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Ccdc188F6WEU2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc188F6WEU2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc188F6WEU2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc188F6WEU2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Trmt13-210ENSMUST00000198454 880 ntBASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc188F6WEU2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc188F6WEU2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc188F6WEU2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc188F6WEU2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc188F6WEU2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc188F6WEU2 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.83■□□□□ 0.92
Ccdc188F6WEU2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc188F6WEU2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc188F6WEU2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc188F6WEU2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc188F6WEU2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc188F6WEU2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc188F6WEU2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc188F6WEU2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.8■□□□□ 0.92
Ccdc188F6WEU2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.8■□□□□ 0.92
Ccdc188F6WEU2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.8■□□□□ 0.92
Ccdc188F6WEU2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc188F6WEU2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc188F6WEU2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc188F6WEU2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms