Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Gm26833-201ENSMUST00000180899 440 ntBASIC20.58■□□□□ 0.89
Ccdc149F6V035 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc149F6V035 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc149F6V035 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc149F6V035 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.56■□□□□ 0.88
Ccdc149F6V035 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc149F6V035 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.55■□□□□ 0.88
Ccdc149F6V035 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc149F6V035 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc149F6V035 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc149F6V035 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc149F6V035 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc149F6V035 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.52■□□□□ 0.88
Ccdc149F6V035 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc149F6V035 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc149F6V035 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc149F6V035 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc149F6V035 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.52■□□□□ 0.87
Ccdc149F6V035 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc149F6V035 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Gm43060-201ENSMUST00000200621 289 ntBASIC20.51■□□□□ 0.87
Ccdc149F6V035 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc149F6V035 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc149F6V035 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc149F6V035 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc149F6V035 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc149F6V035 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ccdc149F6V035 Mir6236-201ENSMUST00000184437 123 ntBASIC20.48■□□□□ 0.87
Ccdc149F6V035 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Ccdc149F6V035 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc149F6V035 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc149F6V035 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms