Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Gm43017-201ENSMUST00000198296 752 ntBASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh17E9PXF0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh17E9PXF0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.77■□□□□ 0.59
Pcdh17E9PXF0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Gm8493-201ENSMUST00000196881 489 ntBASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh17E9PXF0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh17E9PXF0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh17E9PXF0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh17E9PXF0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh17E9PXF0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh17E9PXF0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh17E9PXF0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh17E9PXF0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.71■□□□□ 0.58
Pcdh17E9PXF0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Gm18284-201ENSMUST00000172604 624 ntBASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Gm43173-201ENSMUST00000202246 593 ntBASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh17E9PXF0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms