Protein–RNA interactions for Protein: D3YZZ2

Tgfbr3l, Transforming growth factor, beta receptor III-like, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3lD3YZZ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3lD3YZZ2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3lD3YZZ2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3lD3YZZ2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3lD3YZZ2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3lD3YZZ2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3lD3YZZ2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3lD3YZZ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Tgfbr3lD3YZZ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3lD3YZZ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3lD3YZZ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tgfbr3lD3YZZ2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.26■□□□□ 0.83
Tgfbr3lD3YZZ2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3lD3YZZ2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3lD3YZZ2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm20760-201ENSMUST00000179197 648 ntBASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm7514-201ENSMUST00000209475 934 ntBASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3lD3YZZ2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3lD3YZZ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3lD3YZZ2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm10653-202ENSMUST00000139570 835 ntBASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Gm22240-201ENSMUST00000175225 82 ntBASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3lD3YZZ2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tgfbr3lD3YZZ2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Tgfbr3lD3YZZ2 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.2■□□□□ 0.82
Tgfbr3lD3YZZ2 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.2■□□□□ 0.82
Tgfbr3lD3YZZ2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.2■□□□□ 0.82
Tgfbr3lD3YZZ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tgfbr3lD3YZZ2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Tgfbr3lD3YZZ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms