Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col6a4A2AX52 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col6a4A2AX52 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col6a4A2AX52 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col6a4A2AX52 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.07■□□□□ 0.32
Col6a4A2AX52 Gm18671-201ENSMUST00000214826 683 ntBASIC17.07■□□□□ 0.32
Col6a4A2AX52 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col6a4A2AX52 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col6a4A2AX52 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a4A2AX52 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col6a4A2AX52 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col6a4A2AX52 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Col6a4A2AX52 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.03■□□□□ 0.32
Col6a4A2AX52 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a4A2AX52 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.02■□□□□ 0.32
Col6a4A2AX52 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a4A2AX52 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a4A2AX52 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.02■□□□□ 0.31
Col6a4A2AX52 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a4A2AX52 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.02■□□□□ 0.31
Col6a4A2AX52 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col6a4A2AX52 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Col6a4A2AX52 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col6a4A2AX52 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a4A2AX52 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a4A2AX52 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a4A2AX52 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17■□□□□ 0.31
Col6a4A2AX52 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a4A2AX52 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17■□□□□ 0.31
Col6a4A2AX52 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a4A2AX52 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.99■□□□□ 0.31
Col6a4A2AX52 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms