Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Shroom2A2ALU4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Shroom2A2ALU4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Shroom2A2ALU4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
Shroom2A2ALU4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Shroom2A2ALU4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
Shroom2A2ALU4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Gm5408-201ENSMUST00000197998 747 ntBASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shroom2A2ALU4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Gm44878-201ENSMUST00000205812 1295 ntBASIC32.86■■■□□ 2.85
Shroom2A2ALU4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC32.86■■■□□ 2.85
Shroom2A2ALU4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shroom2A2ALU4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shroom2A2ALU4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Shroom2A2ALU4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Shroom2A2ALU4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC32.83■■■□□ 2.85
Shroom2A2ALU4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Shroom2A2ALU4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Shroom2A2ALU4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Shroom2A2ALU4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
Shroom2A2ALU4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Shroom2A2ALU4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC32.81■■■□□ 2.84
Shroom2A2ALU4 Trmt13-210ENSMUST00000198454 880 ntBASIC32.8■■■□□ 2.84
Shroom2A2ALU4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Shroom2A2ALU4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC32.8■■■□□ 2.84
Shroom2A2ALU4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Shroom2A2ALU4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC32.8■■■□□ 2.84
Shroom2A2ALU4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Shroom2A2ALU4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
Shroom2A2ALU4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Shroom2A2ALU4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC32.79■■■□□ 2.84
Shroom2A2ALU4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Shroom2A2ALU4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Shroom2A2ALU4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC32.77■■■□□ 2.84
Shroom2A2ALU4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Shroom2A2ALU4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
Shroom2A2ALU4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Shroom2A2ALU4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Shroom2A2ALU4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Shroom2A2ALU4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Gm7290-201ENSMUST00000104990 617 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Gm11643-201ENSMUST00000119578 864 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Gm12918-201ENSMUST00000120234 636 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Gm15710-201ENSMUST00000121821 636 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Gm5075-201ENSMUST00000196916 622 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC32.75■■■□□ 2.83
Shroom2A2ALU4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Shroom2A2ALU4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Shroom2A2ALU4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Shroom2A2ALU4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Shroom2A2ALU4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
Shroom2A2ALU4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Shroom2A2ALU4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Shroom2A2ALU4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC32.72■■■□□ 2.83
Shroom2A2ALU4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC32.72■■■□□ 2.83
Shroom2A2ALU4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC32.72■■■□□ 2.83
Shroom2A2ALU4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC32.72■■■□□ 2.83
Shroom2A2ALU4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Shroom2A2ALU4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Shroom2A2ALU4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Shroom2A2ALU4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC32.71■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms