Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm9959-201ENSMUST00000068277 390 ntBASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcna-ps2A0A140T8V5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcna-ps2A0A140T8V5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm7417-201ENSMUST00000192950 473 ntBASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Rps24-207ENSMUST00000224568 714 ntBASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcna-ps2A0A140T8V5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcna-ps2A0A140T8V5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcna-ps2A0A140T8V5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcna-ps2A0A140T8V5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcna-ps2A0A140T8V5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcna-ps2A0A140T8V5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms