Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-2A0A140T8N6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm22238-201ENSMUST00000175222 88 ntBASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-2A0A140T8N6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-2A0A140T8N6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv13-2A0A140T8N6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trbv13-2A0A140T8N6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trbv13-2A0A140T8N6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv13-2A0A140T8N6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Gm9870-201ENSMUST00000063874 645 ntBASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-2A0A140T8N6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-2A0A140T8N6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-2A0A140T8N6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-2A0A140T8N6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-2A0A140T8N6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms