Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Gm5580A0A0N4SVP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm5580A0A0N4SVP8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Gm13238-201ENSMUST00000117655 780 ntBASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5580A0A0N4SVP8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gm5580A0A0N4SVP8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gm5580A0A0N4SVP8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm5580A0A0N4SVP8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.07■■□□□ 1.12
Gm5580A0A0N4SVP8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm5580A0A0N4SVP8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm5580A0A0N4SVP8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm5580A0A0N4SVP8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5580A0A0N4SVP8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.05■■□□□ 1.12
Gm5580A0A0N4SVP8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm5580A0A0N4SVP8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm5580A0A0N4SVP8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm5580A0A0N4SVP8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm5580A0A0N4SVP8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Gm5580A0A0N4SVP8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5580A0A0N4SVP8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5580A0A0N4SVP8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5580A0A0N4SVP8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5580A0A0N4SVP8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5580A0A0N4SVP8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm5580A0A0N4SVP8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm5580A0A0N4SVP8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm5580A0A0N4SVP8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm5580A0A0N4SVP8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm5580A0A0N4SVP8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm5580A0A0N4SVP8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.99■■□□□ 1.11
Gm5580A0A0N4SVP8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5580A0A0N4SVP8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Gm43566-201ENSMUST00000196851 808 ntBASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5580A0A0N4SVP8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Gm5580A0A0N4SVP8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 170.4 ms