Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Scn2aA0A0J9YTW6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2aA0A0J9YTW6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2aA0A0J9YTW6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn2aA0A0J9YTW6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.59■□□□□ 0.57
Scn2aA0A0J9YTW6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scn2aA0A0J9YTW6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2aA0A0J9YTW6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2aA0A0J9YTW6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2aA0A0J9YTW6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn2aA0A0J9YTW6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2aA0A0J9YTW6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Gm12251-201ENSMUST00000117893 792 ntBASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2aA0A0J9YTW6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn2aA0A0J9YTW6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn2aA0A0J9YTW6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn2aA0A0J9YTW6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn2aA0A0J9YTW6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2aA0A0J9YTW6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2aA0A0J9YTW6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn2aA0A0J9YTW6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.52■□□□□ 0.55
Scn2aA0A0J9YTW6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.52■□□□□ 0.55
Scn2aA0A0J9YTW6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn2aA0A0J9YTW6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms