Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-4A0A0G2JG01 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-4A0A0G2JG01 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13n-4A0A0G2JG01 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.27■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm12922-201ENSMUST00000120626 809 ntBASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav13n-4A0A0G2JG01 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav13n-4A0A0G2JG01 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-4A0A0G2JG01 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm12821-201ENSMUST00000120022 600 ntBASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-4A0A0G2JG01 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-4A0A0G2JG01 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms