Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms