Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gm9870-201ENSMUST00000063874 645 ntBASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gm12821-201ENSMUST00000120022 600 ntBASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms