Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gm43173-201ENSMUST00000202246 593 ntBASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv5-43A0A0B4J1J2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Mir6236-201ENSMUST00000184437 123 ntBASIC20.83■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Gm43017-201ENSMUST00000198296 752 ntBASIC20.77■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Igkv5-43A0A0B4J1J2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.77■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-43A0A0B4J1J2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms