Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh7A0A0A6YY83 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh7A0A0A6YY83 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh7A0A0A6YY83 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh7A0A0A6YY83 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh7A0A0A6YY83 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh7A0A0A6YY83 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Pcdh7A0A0A6YY83 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh7A0A0A6YY83 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh7A0A0A6YY83 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh7A0A0A6YY83 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh7A0A0A6YY83 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 Gm12922-201ENSMUST00000120626 809 ntBASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh7A0A0A6YY83 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh7A0A0A6YY83 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Mir6236-201ENSMUST00000184437 123 ntBASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh7A0A0A6YY83 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh7A0A0A6YY83 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdh7A0A0A6YY83 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh7A0A0A6YY83 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh7A0A0A6YY83 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh7A0A0A6YY83 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdh7A0A0A6YY83 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh7A0A0A6YY83 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh7A0A0A6YY83 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pcdh7A0A0A6YY83 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdh7A0A0A6YY83 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Golgb1-201ENSMUST00000023534 498 ntBASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh7A0A0A6YY83 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh7A0A0A6YY83 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms