Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-47A0A0A6YY41 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-47A0A0A6YY41 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ighv1-47A0A0A6YY41 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm5812-201ENSMUST00000061073 957 ntBASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-47A0A0A6YY41 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-47A0A0A6YY41 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.64■□□□□ 0.26
Ighv1-47A0A0A6YY41 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ighv1-47A0A0A6YY41 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ighv1-47A0A0A6YY41 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-47A0A0A6YY41 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Gm15820-201ENSMUST00000201566 728 ntBASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-47A0A0A6YY41 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-47A0A0A6YY41 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms