Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Iqck-206ENSMUST00000208658 2891 ntBASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Rps24-207ENSMUST00000224568 714 ntBASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-18A0A0A6YXN4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-18A0A0A6YXN4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-18A0A0A6YXN4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms