Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-11A0A0A6YWI9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm5921-201ENSMUST00000075898 882 ntBASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-11A0A0A6YWI9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.21□□□□□ -0.13
Ighv1-11A0A0A6YWI9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms