Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm11175-201ENSMUST00000116172 543 ntBASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms