Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav16A0A075B653 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.54■□□□□ 0.08
Trav16A0A075B653 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.54■□□□□ 0.08
Trav16A0A075B653 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16A0A075B653 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.53■□□□□ 0.08
Trav16A0A075B653 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16A0A075B653 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16A0A075B653 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16A0A075B653 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16A0A075B653 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav16A0A075B653 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16A0A075B653 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms