Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-1A0A075B644 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav13-1A0A075B644 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-1A0A075B644 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav13-1A0A075B644 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-1A0A075B644 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-1A0A075B644 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-1A0A075B644 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-1A0A075B644 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Gm27454-201ENSMUST00000185090 204 ntBASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Gm7143-201ENSMUST00000222811 859 ntBASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-1A0A075B644 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13-1A0A075B644 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms