Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Gm21956-201ENSMUST00000179946 522 ntBASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12n-2A0A075B626 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12n-2A0A075B626 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12n-2A0A075B626 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12n-2A0A075B626 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12n-2A0A075B626 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Trav12n-2A0A075B626 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12n-2A0A075B626 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12n-2A0A075B626 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12n-2A0A075B626 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12n-2A0A075B626 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12n-2A0A075B626 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12n-2A0A075B626 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav12n-2A0A075B626 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12n-2A0A075B626 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms