Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4d-3A0A075B625 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4d-3A0A075B625 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4d-3A0A075B625 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Mir3960-201ENSMUST00000198213 73 ntBASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4d-3A0A075B625 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4d-3A0A075B625 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
Trav4d-3A0A075B625 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4d-3A0A075B625 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4d-3A0A075B625 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4d-3A0A075B625 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav4d-3A0A075B625 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4d-3A0A075B625 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms