Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Trav15d-1-dv6d-1A0A075B624 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm11175-201ENSMUST00000116172 543 ntBASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm12366-201ENSMUST00000121722 873 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms