Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7n-5A0A075B604 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav7n-5A0A075B604 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-5A0A075B604 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trav7n-5A0A075B604 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7n-5A0A075B604 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7n-5A0A075B604 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-5A0A075B604 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Gm21956-201ENSMUST00000179946 522 ntBASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-5A0A075B604 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-5A0A075B604 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Gm12821-201ENSMUST00000120022 600 ntBASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Mir6236-201ENSMUST00000184437 123 ntBASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7n-5A0A075B604 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav7n-5A0A075B604 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7n-5A0A075B604 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms