Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-6A0A075B603 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Gm10420-201ENSMUST00000121713 882 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Gm12366-201ENSMUST00000121722 873 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Gm5786-201ENSMUST00000085368 882 ntBASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-6A0A075B603 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-6A0A075B603 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-6A0A075B603 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.96□□□□□ -0.02
Trav6-6A0A075B603 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-6A0A075B603 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Trav6-6A0A075B603 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-6A0A075B603 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms