Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv4A0A075B5I2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.34■□□□□ 0.85
Trbv4A0A075B5I2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv4A0A075B5I2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trbv4A0A075B5I2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Trbv4A0A075B5I2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.32■□□□□ 0.84
Trbv4A0A075B5I2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv4A0A075B5I2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv4A0A075B5I2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv4A0A075B5I2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trbv4A0A075B5I2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv4A0A075B5I2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv4A0A075B5I2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv4A0A075B5I2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv4A0A075B5I2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trbv4A0A075B5I2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.27■□□□□ 0.84
Trbv4A0A075B5I2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trbv4A0A075B5I2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trbv4A0A075B5I2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trbv4A0A075B5I2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trbv4A0A075B5I2 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Gm22238-201ENSMUST00000175222 88 ntBASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv4A0A075B5I2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms