Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk3aQ9JKX8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk3aQ9JKX8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk3aQ9JKX8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm12274-201ENSMUST00000120062 385 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm16165-201ENSMUST00000160140 795 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm24514-201ENSMUST00000174961 285 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm45594-201ENSMUST00000211717 241 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm25125-201ENSMUST00000083340 136 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk3aQ9JKX8 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Snord23-201ENSMUST00000116828 109 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm13117-201ENSMUST00000120894 691 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm13937-201ENSMUST00000121000 988 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm11952-201ENSMUST00000121172 821 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Upk3aQ9JKX8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk3aQ9JKX8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms