Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mir7085-201ENSMUST00000184353 66 ntBASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Olfr284-202ENSMUST00000206647 966 ntBASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm6013-201ENSMUST00000212264 699 ntBASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm10608-202ENSMUST00000213924 676 ntBASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ube4bQ9ES00 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm24845-201ENSMUST00000158034 109 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm9192-201ENSMUST00000183221 985 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm9823-201ENSMUST00000051212 327 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Gm9996-201ENSMUST00000070359 913 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube4bQ9ES00 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Btrc-206ENSMUST00000224102 3037 ntBASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gm11222-201ENSMUST00000119005 738 ntBASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.67□□□□□ -0.7
Ube4bQ9ES00 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms