Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm37458-201ENSMUST00000194055 410 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm30946-201ENSMUST00000198288 724 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm44323-201ENSMUST00000198689 129 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpne8Q9DC53 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cpne8Q9DC53 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms