Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdc40Q9DC48 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Mir1956-201ENSMUST00000157748 65 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm7741-201ENSMUST00000181445 989 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdc40Q9DC48 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm22711-201ENSMUST00000116890 133 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm12899-201ENSMUST00000120565 551 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm13937-201ENSMUST00000121000 988 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.4□□□□□ -0.74
Cdc40Q9DC48 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms