Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.73□□□□□ -0.53
Thumpd2Q9CZB3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thumpd2Q9CZB3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thumpd2Q9CZB3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thumpd2Q9CZB3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms