Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm27046-201ENSMUST00000182160 463 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Rprl1-202ENSMUST00000198476 238 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm44008-201ENSMUST00000204345 412 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm24255-201ENSMUST00000104481 128 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim13Q9CYB0 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.75
Trim13Q9CYB0 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim13Q9CYB0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms