Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm43787-201ENSMUST00000197792 1037 ntBASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.76□□□□□ -0.69
Otud1Q9CUB6 AC165260.4-201ENSMUST00000225924 724 ntBASIC10.76□□□□□ -0.69
Otud1Q9CUB6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Otud1Q9CUB6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm12516-201ENSMUST00000120819 385 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm24398-201ENSMUST00000157870 109 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm28438-201ENSMUST00000188299 345 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm38247-201ENSMUST00000194675 433 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm44158-201ENSMUST00000203881 505 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm44038-201ENSMUST00000203952 889 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm18561-201ENSMUST00000206027 804 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm45856-201ENSMUST00000212752 416 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 AC121986.1-201ENSMUST00000218588 781 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.75□□□□□ -0.69
Otud1Q9CUB6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Otud1Q9CUB6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms