Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Krt88Q9CPR6 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm12241-201ENSMUST00000118330 726 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Gm9368-201ENSMUST00000219348 831 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Krt88Q9CPR6 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm37301-201ENSMUST00000195412 568 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm44364-201ENSMUST00000198368 141 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Cts7-204ENSMUST00000225321 1257 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms