Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm14676-201ENSMUST00000117722 858 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm15539-201ENSMUST00000118452 566 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 AC158122.1-201ENSMUST00000227398 673 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 AC158519.1-201ENSMUST00000228615 179 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm11295-201ENSMUST00000121379 803 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Cdh23Q99PF4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 CT025547.1-201ENSMUST00000225127 578 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 AC124555.1-201ENSMUST00000227051 880 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm18119-201ENSMUST00000219972 616 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm26440-201ENSMUST00000082591 129 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Mir291b-201ENSMUST00000104838 79 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm12011-201ENSMUST00000119734 618 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm14370-201ENSMUST00000122460 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm15273-201ENSMUST00000142302 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm7023-201ENSMUST00000147295 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm8488-201ENSMUST00000176112 1280 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm14357-201ENSMUST00000178352 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm14361-201ENSMUST00000178547 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm14348-201ENSMUST00000179183 868 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm6317-201ENSMUST00000183159 1000 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm8557-201ENSMUST00000220777 475 ntBASIC11□□□□□ -0.65
Cdh23Q99PF4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh23Q99PF4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11□□□□□ -0.65
Cdh23Q99PF4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm11700-201ENSMUST00000119409 403 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm4996-201ENSMUST00000122042 784 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Platr10-202ENSMUST00000191479 818 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 AC163351.1-201ENSMUST00000225539 737 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 AC160138.2-201ENSMUST00000220255 1531 ntBASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cdh23Q99PF4 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms