Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.86□□□□□ -0.67
Rnf111Q99ML9 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.86□□□□□ -0.67
Rnf111Q99ML9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf111Q99ML9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm11941-201ENSMUST00000119904 610 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm15566-201ENSMUST00000121130 590 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 B9d1os-201ENSMUST00000137010 674 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Mir6979-201ENSMUST00000183927 56 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm6905-201ENSMUST00000205729 511 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm1821-202ENSMUST00000227415 750 ntBASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf111Q99ML9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm23251-201ENSMUST00000103773 110 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm13809-201ENSMUST00000117921 597 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Mir5120-201ENSMUST00000175020 78 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm29499-201ENSMUST00000189151 486 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm28329-201ENSMUST00000191208 689 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm29171-201ENSMUST00000191397 486 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm4978-201ENSMUST00000071565 801 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms