Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm5178-201ENSMUST00000219380 898 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm18065-201ENSMUST00000221395 526 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx6-1Q99MA9 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm8019-201ENSMUST00000119317 587 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm27440-201ENSMUST00000184785 107 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm33707-201ENSMUST00000195135 569 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm18123-201ENSMUST00000210874 822 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm6564-201ENSMUST00000075377 619 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm10580-201ENSMUST00000097985 396 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm10582-201ENSMUST00000097987 396 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gm10583-201ENSMUST00000097988 396 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.57□□□□□ -0.72
Nkx6-1Q99MA9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm20781-201ENSMUST00000193154 693 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm2345-201ENSMUST00000193451 589 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms