Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm5976-201ENSMUST00000180794 996 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm27444-201ENSMUST00000184157 137 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm8226-201ENSMUST00000190511 798 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm5278-201ENSMUST00000055957 552 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RtcbQ99LF4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.8□□□□□ -0.2
RtcbQ99LF4 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm6755-201ENSMUST00000100598 864 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm6740-201ENSMUST00000100617 864 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm23132-201ENSMUST00000104254 132 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm28196-201ENSMUST00000187719 640 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm6794-201ENSMUST00000203829 457 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.79□□□□□ -0.2
RtcbQ99LF4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RtcbQ99LF4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RtcbQ99LF4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC13.78□□□□□ -0.2
RtcbQ99LF4 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.78□□□□□ -0.2
RtcbQ99LF4 Mir1893-201ENSMUST00000122565 83 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms