Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm13094-201ENSMUST00000117930 409 ntBASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm26368-201ENSMUST00000157826 118 ntBASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm8894-201ENSMUST00000074642 666 ntBASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Erich3-203ENSMUST00000189969 3460 ntBASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd2Q99JR8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm16459-201ENSMUST00000121443 686 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Mir432-201ENSMUST00000157230 75 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm16547-201ENSMUST00000159474 293 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm18014-201ENSMUST00000183369 817 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm43610-201ENSMUST00000199117 365 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd2Q99JR8 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd2Q99JR8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms