Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col23a1Q8K4G2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col23a1Q8K4G2 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm24066-201ENSMUST00000104515 131 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm12961-201ENSMUST00000120507 1050 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 H2afy3-201ENSMUST00000151919 1112 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm6677-201ENSMUST00000195100 441 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm42908-201ENSMUST00000197508 870 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 CT571271.1-201ENSMUST00000227071 670 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.46□□□□□ -0.25
Col23a1Q8K4G2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col23a1Q8K4G2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Btrc-209ENSMUST00000224478 2194 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Snora68-201ENSMUST00000104375 131 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm16480-201ENSMUST00000120439 832 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm23479-201ENSMUST00000158876 122 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm22662-201ENSMUST00000175290 256 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 AC165092.1-201ENSMUST00000224018 486 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 AC139155.1-201ENSMUST00000226043 444 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col23a1Q8K4G2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col23a1Q8K4G2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms