Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm22323-201ENSMUST00000103832 109 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43822-201ENSMUST00000200285 476 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm12579-201ENSMUST00000118040 783 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28aQ8CEI3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms