Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm37246-201ENSMUST00000192665 835 ntBASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm8574-201ENSMUST00000203207 924 ntBASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc38Q8CDN8 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm12218-201ENSMUST00000117666 399 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm12997-201ENSMUST00000120207 640 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm21778-201ENSMUST00000178779 471 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm43058-201ENSMUST00000197645 625 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm2517-201ENSMUST00000215651 348 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.47□□□□□ -0.41
Ccdc38Q8CDN8 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 AC115891.3-201ENSMUST00000219161 2472 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm12217-201ENSMUST00000118858 696 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm25732-201ENSMUST00000175168 60 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc38Q8CDN8 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc38Q8CDN8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms